org.biojava3.aaproperties
public class Constraints extends java.lang.Object
IPeptideProperties
Constructor and Description |
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Constraints() |
Modifier and Type | Method and Description |
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static void |
initExtinctionCoefficient()
Does the initialization of extinction coefficient based on
http://au.expasy.org/tools/protparam-doc.html
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static void |
initMolecularWeight()
Does the initialization of molecular weights based on http://au.expasy.org/tools/findmod/findmod_masses.html#AA
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public static AminoAcidCompound A
public static AminoAcidCompound R
public static AminoAcidCompound N
public static AminoAcidCompound D
public static AminoAcidCompound C
public static AminoAcidCompound E
public static AminoAcidCompound Q
public static AminoAcidCompound G
public static AminoAcidCompound H
public static AminoAcidCompound I
public static AminoAcidCompound L
public static AminoAcidCompound K
public static AminoAcidCompound M
public static AminoAcidCompound F
public static AminoAcidCompound P
public static AminoAcidCompound S
public static AminoAcidCompound T
public static AminoAcidCompound W
public static AminoAcidCompound Y
public static AminoAcidCompound V
public static java.util.Map<AminoAcidCompound,java.lang.Double> aa2ExtinctionCoefficient
public static java.util.Map<AminoAcidCompound,java.lang.Double> aa2MolecularWeight
public static java.util.Map<AminoAcidCompound,java.lang.Double> aa2Hydrophathicity
public static java.util.Map<AminoAcidCompound,java.lang.Double> aa2PKa
public static java.util.Map<java.lang.String,java.lang.Double> diAA2Instability
public static java.util.Map<AminoAcidCompound,java.lang.Double> aa2NTerminalPka
public static java.util.Map<AminoAcidCompound,java.lang.Double> aa2CTerminalPka
public static void initMolecularWeight()
public static void initExtinctionCoefficient()