Interface | Description |
---|---|
AlignmentCalculationRunnable |
Class | Description |
---|---|
AboutDialog | |
AlignmentCalc |
A class that obtains two structures via DAS and aligns them
This is done in a separate thread.
|
AlignmentCalcDB | |
AlignmentGui |
A JFrame that allows to trigger a pairwise structure alignment,
either from files in a directory,
or after manual upload.
|
AlignmentTextPanel | |
ChooseDirAction |
Ask the user to provide a directory containting PDB files.
|
ConfigPDBInstallPanel | |
DBResultTable | |
DBSearchGUI | |
DisplayAFP |
A utility class for visualistion of structure alignments
|
DotPlotPanel |
Displays the dot plot trace for an alignment.
|
GUIAlignmentProgressListener |
a GUI that allows to watch progress as multiple alignments are being processed.
|
GUIFarmJobRunnable | |
HelpDialog | |
JPrintPanel | |
MenuCreator |
Create the menu for Fatcat/CE structure alignment stuff
|
MyAlignmentLoadListener | |
MyDistMaxListener | |
MyExportListener | |
MyOpenPdbFileListener | |
MySaveFileListener | |
MyTableRowSorter | |
ParameterGUI | |
SelectPDBPanel |
A Panel that allows user to specify PDB & chain ID, as well as sub-ranges
|
ShowPDBIDListener | |
StructureAlignmentDisplay | |
SystemInfo |