NiBabel

Access a cacophony of neuro-imaging file formats

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nibabel

Reggie -- the one

API Documentation

nibabel This package provides read and write access to some common medical and

File Formats

analyze Header and image for the basic Mayo Analyze format
spm2analyze Header reading functions for SPM2 version of analyze format
spm99analyze Header reading functions for SPM version of analyze format
gifti GIfTI format IO
minc
nicom DICOM reader
nifti1 Header reading / writing functions for nifti1 image format
parrec Humble attempt to read images in PAR/REC format.
trackvis Read and write trackvis files

Image Utilities

eulerangles Module implementing Euler angle rotations and their conversions
funcs Processor functions for images
imageclasses Define supported image classes and names
imageglobals Defaults for images and headers
loadsave
orientations Utilities for calculating and applying affine orientations
quaternions Functions to operate on, or return, quaternions.
spatialimages Very simple spatial image class
volumeutils Utility functions for analyze-like formats

Miscellaneous Helpers

arrayproxy Array proxy base class
batteryrunners Battery runner classes and Report classes
fileholders Fileholder class
filename_parser Create filename pairs, triplets etc, with expected extensions
onetime Descriptor support for NIPY.
tmpdirs Contexts for with statement providing temporary directories