pal.alignment
public class BootstrappedAlignment extends AbstractAlignment
IdGroup.Utils
idGroup, numSeqs, numSites
Constructor and Description |
---|
BootstrappedAlignment(Alignment raw)
Constructor
|
Modifier and Type | Method and Description |
---|---|
void |
bootstrap()
bootstrap alignment
|
char |
getData(int seq,
int site)
sequence alignment at (sequence, site)
|
getAlignedSequenceString, getChar, getDataType, getIdCount, getIdentifier, getLength, getSequenceCount, getSiteCount, getState, getStates, guessDataType, isGap, isUnknownState, report, setDataType, setIdentifier, toString, whichIdNumber
public BootstrappedAlignment(Alignment raw)
raw
- original alignmentpublic char getData(int seq, int site)
getData
in interface Alignment
getData
in class AbstractAlignment
public void bootstrap()