pal.statistics
public static interface TopologyTestEngine.StatisticsHandler
Modifier and Type | Method and Description |
---|---|
double[] |
getOriginalTestStatistics(double[] originalOptimisedLogLikelihoods,
int numberOfTopologies) |
double[] |
getPValues(double[] originalOptimisedLogLikelihoods,
double[][] replicateLogLikelihoods,
int numberOfReplicates,
int numberOfTopologies) |
double[] getOriginalTestStatistics(double[] originalOptimisedLogLikelihoods, int numberOfTopologies)
double[] getPValues(double[] originalOptimisedLogLikelihoods, double[][] replicateLogLikelihoods, int numberOfReplicates, int numberOfTopologies)
originalOptimisedLogLikelihoods
- stored as [topology]replicateLogLikelihoods
- store as [replicate][topology]numberOfTopologies
- the number of topologiesnumberOfTopologies
- the number of replicates