jebl.evolution.trees
public class CladeSystem extends java.lang.Object
Constructor and Description |
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CladeSystem() |
CladeSystem(RootedTree tree) |
Modifier and Type | Method and Description |
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void |
add(RootedTree tree)
adds all the clades in the tree
|
java.util.Set<Taxon> |
getClade(int index) |
int |
getCladeCount()
get number of unique clades
|
double |
getCladeFrequency(int index)
get clade frequency
|
java.lang.String |
getCladeString(int index) |
public CladeSystem()
public CladeSystem(RootedTree tree)
tree
- public int getCladeCount()
public java.util.Set<Taxon> getClade(int index)
public java.lang.String getCladeString(int index)
public double getCladeFrequency(int index)
public void add(RootedTree tree)
http://code.google.com/p/jebl2/